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libSBML 5.8.0 Perl API
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- s -
saveReferencedElement() :
Deletion
,
Port
,
SBaseRef
,
Replacing
SBaseExtensionPoint() :
SBaseExtensionPoint
SBasePluginCreator() :
SBasePluginCreator< SBasePluginType, SBMLExtensionType >
SBasePluginCreatorBase() :
SBasePluginCreatorBase
SBaseRef() :
SBaseRef
SBMLConverter() :
SBMLConverter
SBMLDocument() :
SBMLDocument
SBMLDocumentPlugin() :
SBMLDocumentPlugin
SBMLDocumentPluginNotRequired() :
SBMLDocumentPluginNotRequired
SBMLError() :
SBMLError
SBMLExtension() :
SBMLExtension
SBMLExtensionException() :
SBMLExtensionException
SBMLExtensionNamespaces() :
SBMLExtensionNamespaces< SBMLExtensionType >
SBMLExtensionRegister() :
SBMLExtensionRegister< SBMLExtensionType >
SBMLFileResolver() :
SBMLFileResolver
SBMLFunctionDefinitionConverter() :
SBMLFunctionDefinitionConverter
SBMLInitialAssignmentConverter() :
SBMLInitialAssignmentConverter
SBMLInternalValidator() :
SBMLInternalValidator
SBMLLevelVersionConverter() :
SBMLLevelVersionConverter
SBMLNamespaces() :
SBMLNamespaces
SBMLReader() :
SBMLReader
SBMLResolver() :
SBMLResolver
SBMLRuleConverter() :
SBMLRuleConverter
SBMLStripPackageConverter() :
SBMLStripPackageConverter
SBMLUnitsConverter() :
SBMLUnitsConverter
SBMLUri() :
SBMLUri
SBMLValidator() :
SBMLValidator
SBMLWriter() :
SBMLWriter
setAdditionalDirs() :
SBMLFileResolver
setAnnotation() :
SpeciesReference
,
Model
,
SBase
,
SpeciesReference
setApplicableValidators() :
SBMLInternalValidator
setAreaUnits() :
Model
setAttributes() :
XMLToken
setBiologicalQualifierType() :
CVTerm
setBoolValue() :
ConversionOption
,
ConversionProperties
setBoundaryCondition() :
Species
setCharacter() :
ASTNode
setCharge() :
Species
setClass() :
ASTNode
setColumn() :
XMLError
setCompartment() :
Reaction
,
Species
setCompartmentType() :
Compartment
setConsistencyChecks() :
SBMLInternalValidator
,
SBMLDocument
setConsistencyChecksForConversion() :
SBMLInternalValidator
,
SBMLDocument
setConstant() :
Compartment
,
Parameter
,
Species
,
SpeciesReference
setConversionFactor() :
Model
,
Species
,
ReplacedElement
setConversionValidators() :
SBMLInternalValidator
setCreatedDate() :
ModelHistory
setDateAsString() :
Date
setDay() :
Date
setDelay() :
Event
setDeletion() :
ReplacedElement
setDenominator() :
SpeciesReference
setDescription() :
ConversionOption
setDivider() :
CompModelPlugin
setDocument() :
SBMLConverter
,
SBMLValidator
setDoubleValue() :
ConversionOption
,
ConversionProperties
setElementNamespace() :
SBasePlugin
setElementText() :
SBase
setEmail() :
ModelCreator
setEnabled() :
SBMLExtension
,
SBMLExtensionRegistry
setEnd() :
XMLToken
setEOF() :
XMLToken
setExponent() :
Unit
setExtentConversionFactor() :
Submodel
setExtentUnits() :
Model
setFamilyName() :
ModelCreator
setFast() :
Reaction
setFloatValue() :
ConversionOption
,
ConversionProperties
setFormula() :
KineticLaw
,
Rule
setGivenName() :
ModelCreator
setHasOnlySubstanceUnits() :
Species
setHour() :
Date
setHoursOffset() :
Date
setId() :
Event
,
FunctionDefinition
,
Model
,
Parameter
,
Reaction
,
SimpleSpeciesReference
,
Species
,
SpeciesType
,
UnitDefinition
,
Deletion
,
ExternalModelDefinition
,
Port
,
Submodel
,
ASTNode
,
Compartment
,
CompartmentType
setIdRef() :
SBaseRef
setInitialAmount() :
Species
setInitialConcentration() :
Species
setInitialValue() :
Trigger
setIntValue() :
ConversionOption
,
ConversionProperties
setKey() :
ConversionOption
setKind() :
Unit
setKineticLaw() :
Reaction
setL1TypeCode() :
Rule
setLengthUnits() :
Model
setLevelAndVersion() :
SBMLDocument
setLine() :
XMLError
setLocationURI() :
SBMLDocument
setMath() :
Constraint
,
Delay
,
EventAssignment
,
FunctionDefinition
,
KineticLaw
,
Priority
,
Rule
,
StoichiometryMath
,
Trigger
,
InitialAssignment
setMd5() :
ExternalModelDefinition
setMessage() :
Constraint
setMetaId() :
SBase
setMetaIdRef() :
SBaseRef
setMinute() :
Date
setMinutesOffset() :
Date
setModel() :
L3ParserSettings
,
SBMLDocument
setModelHistory() :
SBase
setModelQualifierType() :
CVTerm
setModelRef() :
ExternalModelDefinition
,
Submodel
setModifiedDate() :
ModelHistory
setMonth() :
Date
setMultiplier() :
Unit
setName() :
ASTNode
,
Compartment
,
Event
,
FunctionDefinition
,
Model
,
Reaction
,
SimpleSpeciesReference
,
Species
,
Parameter
,
UnitDefinition
,
Deletion
,
ExternalModelDefinition
,
Port
,
Submodel
,
SpeciesType
,
CompartmentType
setNamespaces() :
SBase
,
XMLToken
setNotes() :
SBase
setOffset() :
Unit
setOrganisation() :
ModelCreator
setOrganization() :
ModelCreator
setOutside() :
Compartment
setPackageRequired() :
SBMLDocument
setParseAvogadroCsymbol() :
L3ParserSettings
setParseCollapseMinus() :
L3ParserSettings
setParseLog() :
L3ParserSettings
setParseUnits() :
L3ParserSettings
setPersistent() :
Trigger
setPkgRequired() :
SBMLDocument
setPortRef() :
SBaseRef
,
Port
setPriority() :
Event
setProgramName() :
SBMLWriter
setProgramVersion() :
SBMLWriter
setProperties() :
SBMLConverter
setQualifierType() :
CVTerm
setReplacedBy() :
CompSBasePlugin
setRequired() :
SBMLDocumentPlugin
setReversible() :
Reaction
setSBaseRef() :
SBaseRef
setSBOTerm() :
SBase
setScale() :
Unit
setSecond() :
Date
setSignOffset() :
Date
setSize() :
Compartment
setSource() :
ExternalModelDefinition
setSpatialDimensions() :
Compartment
setSpatialSizeUnits() :
Species
setSpecies() :
SimpleSpeciesReference
setSpeciesType() :
Species
setStoichiometry() :
SpeciesReference
setStoichiometryMath() :
SpeciesReference
setStyle() :
ASTNode
setSubmodelRef() :
Replacing
setSubstanceConversionFactor() :
Submodel
setSubstanceUnits() :
Model
,
KineticLaw
,
Species
setSymbol() :
InitialAssignment
setTargetNamespaces() :
ConversionProperties
setTimeConversionFactor() :
Submodel
setTimeUnits() :
Event
,
Model
,
KineticLaw
setTrigger() :
Event
setTriple() :
XMLToken
setType() :
ASTNode
,
ConversionOption
setUnitRef() :
SBaseRef
setUnits() :
Parameter
,
Rule
,
ASTNode
,
Species
,
Compartment
setUserData() :
ASTNode
,
SBase
setUseValuesFromTriggerTime() :
Event
setValue() :
ASTNode
,
ConversionProperties
,
ASTNode
,
ConversionOption
,
ASTNode
,
Parameter
setVariable() :
Rule
,
EventAssignment
setVolume() :
Compartment
setVolumeUnits() :
Model
setYear() :
Date
SimpleSpeciesReference() :
SimpleSpeciesReference
simplify() :
UnitDefinition
size() :
ListOf
Species() :
Species
SpeciesReference() :
SpeciesReference
SpeciesType() :
SpeciesType
StoichiometryMath() :
StoichiometryMath
stringToInt() :
SBO
Submodel() :
Submodel
swapChildren() :
ASTNode
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