"git annex watch" will add the file generated by "git annex map", which is probably not intended. Shouldn’t this file be created in /tmp or .git/annex/ or somewhere else?

Indeed, so done --Joey

/tmp $ cd test/
/tmp/test $ git init
Initialized empty Git repository in /tmp/test/.git/
/tmp/test $ git annex init
init  ok
(Recording state in git...)
/tmp/test $ git annex watch
/tmp/test $ git annex map
map /tmp/test ok

  running: dot -Tx11 map.dot

ok
/tmp/test $ ls -l
insgesamt 4
lrwxrwxrwx 1 jojo jojo 180 Jul 15 23:36 map.dot -> .git/annex/objects/P3/76/SHA256-s208--44199582b5948512ff12cf03de0b86fa1bebf09785dba2827fe52afee0afbe3d/SHA256-s208--44199582b5948512ff12cf03de0b86fa1bebf09785dba2827fe52afee0afbe3d
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