trinityrnaseq (2.5.1+dfsg-1) unstable; urgency=medium

  * New upstream release. Updated watch file.
  * NeedlemanWunschGotohBanded.java moved into trinityrnasq_jaligner package
  * Much of the sample data is missing from upstream's tarball, so some tests
    have been turned off

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Sun, 11 Feb 2018 09:13:04 -0800

trinityrnaseq (2.2.0+dfsg-4) unstable; urgency=medium

  [ Steffen Moeller ]
  * debian/upstream/metadata
    - Completed references to registries
    - yamllint clean
  * debian/copyright
    - Corrected upstream-name to 'Trinity'

  [ Michael R. Crusoe ]
  * Removed unneeded dependency on r-bioc-edger

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Sat, 18 Nov 2017 05:00:08 -0800

trinityrnaseq (2.2.0+dfsg-3) unstable; urgency=medium

  * Team upload

  [ Gert Wollny ]
  * Fix build gcc 7
    Closes: #853687  

  [ Andreas Tille ]
  * debhelper 10
    Closes: #865262
  * Standards-Version: 4.1.0 (no changes needed)
  * hardening=+all
  * remove unused lintian override
  * Build-Depends: bowtie2, yellyfish
    Closes: #860645

 -- Andreas Tille <tille@debian.org>  Fri, 01 Sep 2017 21:57:01 +0200

trinityrnaseq (2.2.0+dfsg-2) unstable; urgency=medium

  * Team upload.
  * Fix build on GCC 6 (Closes: #831110)

 -- Sascha Steinbiss <satta@debian.org>  Fri, 05 Aug 2016 19:21:49 +0000

trinityrnaseq (2.2.0+dfsg-1) unstable; urgency=medium

  [ Andreas Tille ]
  * Team upload
  * d/watch: Use xz compression for upstream source

  [ Michael R. Crusoe ]
  * new upstream version
  * prune d/copyright excludes
  * refresh patches, drop a few included upstream
  * Standards-Version: '3.9.7' -> '3.9.8'

 -- Michael R. Crusoe <michael.crusoe@gmail.com>  Mon, 23 May 2016 11:46:45 -0700

trinityrnaseq (2.1.1+dfsg2-1) unstable; urgency=low

  * Properly harden Chrysalis binaries
  * Drop Galaxy plugin
  * Increment dfsg version for the above

 -- Michael R. Crusoe <crusoe@ucdavis.edu>  Thu, 25 Feb 2016 00:03:48 -0800

trinityrnaseq (2.1.1+dfsg-2) unstable; urgency=medium

  * Split install of arch-dependent & arch-independent files, fixes FTBFS
    (Closes: #813958)

 -- Michael R. Crusoe <crusoe@ucdavis.edu>  Sun, 07 Feb 2016 01:21:41 -0800

trinityrnaseq (2.1.1+dfsg-1) unstable; urgency=low

  * Initial release (Closes: #777697)

 -- Michael R. Crusoe <crusoe@ucdavis.edu>  Thu, 22 Oct 2015 08:31:56 -0700