libbpp-phyl (2.3.2-2) unstable; urgency=medium
* Fixed covariant return type on 32bits arch.
Closes: #889953
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Fri, 09 Feb 2018 09:10:11 +0200
libbpp-phyl (2.3.2-1) unstable; urgency=medium
[ Julien Dutheil ]
* Standards-Version: 4.1.2
[ Andreas Tille ]
* cme fix dpkg-control
* debhelper 11
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 05 Feb 2018 20:59:41 +0200
libbpp-phyl (2.3.1-10) unstable; urgency=medium
[ Julien Dutheil ]
* Does not override debian cxx flags anymore.
[ Andreas Tille ]
* Rebuild with gcc-7
Closes: #871085
* Standards-Version: 4.0.1
* Fix d-shlibs override
-- Andreas Tille <tille@debian.org> Wed, 23 Aug 2017 23:32:26 +0200
libbpp-phyl (2.3.1-9) unstable; urgency=medium
* Further increased time out limit for unit tests.
Closes: 866365
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 17 Jul 2017 09:24:23 +0200
libbpp-phyl (2.3.1-8) unstable; urgency=medium
* another try to have test_likelihood_clock pass on mips architecture.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Sun, 16 Jul 2017 10:43:18 +0200
libbpp-phyl (2.3.1-7) unstable; urgency=medium
* Some tests redesign.
Should hopefully make test_mapping more stable, and have
test_likelihood_clock pass on mips architecture
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Sat, 15 Jul 2017 22:48:50 +0200
libbpp-phyl (2.3.1-6) unstable; urgency=medium
[ Julien Dutheil ]
* remove some deprecation warnings which might lead to timeouts in tests
[ Andreas Tille ]
* Remove postinst, postrm and prerm
-- Andreas Tille <tille@debian.org> Fri, 14 Jul 2017 14:20:59 +0200
libbpp-phyl (2.3.1-5) unstable; urgency=medium
* Fix build time issues for remaining architectures
Closes: #865552
-- Andreas Tille <tille@debian.org> Tue, 27 Jun 2017 11:16:14 +0200
libbpp-phyl (2.3.1-4) unstable; urgency=medium
* Relax timeout for tests.
Dealswith: #865552
* d-shlibs (>= 0.80) contains needed override
-- Andreas Tille <tille@debian.org> Mon, 26 Jun 2017 12:39:58 +0200
libbpp-phyl (2.3.1-3) unstable; urgency=medium
* cmake files belong to /usr/lib/$(DEB_HOST_MULTIARCH)
* debhelper 10
* Standards-Version: 4.0.0 (no changes needed)
-- Andreas Tille <tille@debian.org> Fri, 23 Jun 2017 09:10:34 +0200
libbpp-phyl (2.3.1-2) unstable; urgency=medium
* Make sure cmake files will be installed also on i386
-- Andreas Tille <tille@debian.org> Thu, 22 Jun 2017 08:03:24 +0200
libbpp-phyl (2.3.1-1) unstable; urgency=medium
* New upstream version
* d/watch: point to github
-- Andreas Tille <tille@debian.org> Tue, 13 Jun 2017 16:39:48 +0200
libbpp-phyl (2.2.0-1) unstable; urgency=medium
* New upstream version
* Moved packaging to Git
* Better description
* Team maintenance in Debian Med team
* cme fix dpkg-control
* Source package section: science
* Add watch file
* debhelper 9
* DEP5
* short dh rules file using d-shlibs
* Library transition
Closes: #791094
-- Andreas Tille <tille@debian.org> Thu, 21 Apr 2016 14:16:41 +0200
libbpp-phyl (2.1.0-1) unstable; urgency=low
* New RateDistribution classes
* New models for protein sequences (COaLA)
* Support for gaps in parsimony score
* Improved and extended support for BppO
* Several bugs fixed and warnings removed
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 07 Mar 2013 15:58:00 +0100
libbpp-phyl (2.0.3-1) unstable; urgency=low
* Reorganized model hierarchy
* New pairwise models
* Several bugs fixed
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 09 Feb 2013 16:00:00 +0100
libbpp-phyl (2.0.2-1) unstable; urgency=low
* RFP: Bio++ -- The Bio++ bioinformatics libraries. (Closes: #616373).
* Packages are now non-native.
* Exact substitution mapping with detailled counts.
* Backup system for ML estimation.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 09 Jun 2011 11:00:00 +0100
libbpp-phyl (2.0.1) unstable; urgency=low
* Fixed bug #27
* Improved tree drawing algorithms.
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 28 Feb 2011 09:00:00 +0100
libbpp-phyl (2.0.0) unstable; urgency=low
* Better mixed models
* Extended substitution mapping framework
* More bug fixed, notably in simulation procedures
* Topology comparison tools (ELW)
* Improved graphic classes
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Mon, 07 Feb 2011 09:00:00 +0100
libbpp-phyl (1.9.0) unstable; urgency=low
* Several bugs fixed and improvements, compilation with -Weffc++
* Codon models
* Improved non-homogeneous classes
* Improved tree drawing classes
-- Julien Dutheil <julien.dutheil@univ-montp2.fr> Thu, 25 Mar 2010 13:47:24 +0100
libbpp-phyl (1.8.0) unstable; urgency=low
* Several buf fixed and improvements.
* New support for Nexus tree files.
* New syntax for model description using keyvals.
-- Julien Dutheil <jdutheil@birc.au.dk> Wed, 10 Jun 2009 11:28:58 +0100
libbpp-phyl (1.7.0) unstable; urgency=low
* Several bug fixed and improvements...
-- Julien Dutheil <jdutheil@birc.au.dk> Thu, 11 Dec 2008 12:21:37 +0100
libbpp-phyl (1.6.0) unstable; urgency=low
* New +F protein models + bugs fixed.
-- Julien Dutheil <jdutheil@birc.au.dk> Wed, 24 Sep 2008 14:07:26 +0200
libbpp-phyl (1.5.1) unstable; urgency=low
* Initial Release.
-- Julien Dutheil <jdutheil@birc.au.dk> Mon, 21 Jul 2008 15:17:26 +0200