abyss (2.0.2-3) unstable; urgency=medium * Team upload. [ Nadiya Sitdykova ] * Add simple autopkgtest test-suite. [ Steffen Moeller ] * [debian/upstream/metadata] Added references to bio.tools, OMICtools and RRID [ Sascha Steinbiss ] * Add missing dependency on bsdmainutils. * Use HTTPS URL for Format entry in d/copyright. * Bump Standards-Version. -- Nadiya Sitdykova Fri, 30 Jun 2017 16:56:26 -0400 abyss (2.0.2-2) unstable; urgency=medium * FTBFS on mips and other big-endian architectures (Thanks for the patch to Daniel Knezevic ) Closes: #847574 * debhelper 10 * d/watch: version=4 -- Andreas Tille Sun, 11 Dec 2016 14:24:34 +0100 abyss (2.0.2-1) unstable; urgency=medium * New upstream version -- Andreas Tille Tue, 01 Nov 2016 12:06:10 +0100 abyss (2.0.1-1) unstable; urgency=medium [ Andreas Tille ] * New upstream version now licensed under GPL-3 * Moved package to main * cme fix dpkg-control * use markdown to create doc * hardening=+all [ Gert Wollny ] * Force gtest to use c++11 based std::tuple -- Andreas Tille Mon, 10 Oct 2016 19:57:56 +0200 abyss (1.9.0-1) unstable; urgency=medium * New upstream version Adapted patches * Took over COPYRIGHT from upstream as debian/copyright * Dropped Shaun Jackman from Uploaders since he confirmed that he will not be able to maintain the package * Build-Depends: libsqlite3-dev * Script uses bash syntax so request bash interpreter -- Andreas Tille Thu, 16 Jul 2015 11:28:54 +0200 abyss (1.5.2-2) unstable; urgency=medium * abyss-fixmate and DistanceEst are expected to be in /usr/bin by sga * configure was missing ghc -> mention this fact in README.source for further inspection * Fix FTBFS on 32-bit architectures (thanks for the patch to Graham Inggs ) Closes: #780409 * cme fix dpkg-control -- Andreas Tille Mon, 18 May 2015 14:24:21 +0200 abyss (1.5.2-1) unstable; urgency=medium * New upstream version (remove applied patches) * d/watch: Moved to github * d/control+d/rules: use dh-autoreconf * d/control: Build-Depends: libtext-multimarkdown-perl * cme fix dpkg-control * d/control: Build-Depends: libgtest-dev to enable unit tests at build time * d/control: drop copy of citation info from long description * patch to make gtest work (thanks to Anthony Raymond ) * Drop privacy breach in doc -- Andreas Tille Mon, 15 Sep 2014 14:53:24 +0200 abyss (1.3.6-1) unstable; urgency=low * Team upload (Closes: #722072). e05ee57 Imported Upstream version 1.3.5 b391f1f Imported Upstream version 1.3.6 (Closes: #702440) 7edc28b Signal the use of git-buildpackage with this configuration file. a3beaac Normalised source package control file with config-model-edit. dd86394 Conforms with Policy version 3.9.4. 71d42ad Normalised VCS URLs. -- Charles Plessy Sun, 08 Sep 2013 11:36:44 +0900 abyss (1.3.4-4) unstable; urgency=low * Team upload. * Fix FTBFS with gcc-4.8, -Werror=unused-local-typedefs. * Enable parallel build. -- Dmitrijs Ledkovs Mon, 01 Jul 2013 21:06:59 +0100 abyss (1.3.4-3) unstable; urgency=low * Disable POPCNT Closes: #697344 * Add debian/README.debian to inform users about this change asking for some comparison of the speed to consider other means for better performance -- Andreas Tille Fri, 04 Jan 2013 11:07:10 +0100 abyss (1.3.4-2) unstable; urgency=low * Team upload * debian/upstream: BibTeX compliant authors -- Andreas Tille Fri, 01 Jun 2012 08:38:29 +0200 abyss (1.3.4-1) unstable; urgency=low * New upstream release. * debian/copyright: Add CityHash, which has an Expat license. * debian/control: Bump Standards-Version to 3.9.3.1. -- Shaun Jackman Thu, 31 May 2012 11:39:13 -0700 abyss (1.3.3-2) unstable; urgency=low * debian/control: - Team maintenance in Debian Med team - Moved packaging to Git * debian/upstream: Add citation information * debhelper 9 (control+compat) * debian/copyright: Add github as another location for obtaining the source -- Andreas Tille Sun, 01 Apr 2012 08:44:48 +0200 abyss (1.3.3-1) unstable; urgency=low * New upstream release. * Some components are dual-licensed BCCA-Academic or GPL-3+. * Bump Standards-Version to 3.9.3. -- Shaun Jackman Tue, 13 Mar 2012 15:43:49 -0700 abyss (1.3.2-1) unstable; urgency=low * New upstream release. -- Shaun Jackman Tue, 13 Dec 2011 17:04:24 -0800 abyss (1.3.1-1) unstable; urgency=low * New upstream release. -- Shaun Jackman Mon, 24 Oct 2011 11:32:59 -0700 abyss (1.3.0-1) unstable; urgency=low * New upstream release. * Add libboost-graph-dev to Build-Depends. -- Shaun Jackman Sun, 11 Sep 2011 10:00:13 -0700 abyss (1.2.7-3) unstable; urgency=low * Align/Aligner.cpp, Scaffold/scaffold.cc: Fix FTBFS bug for GCC 4.6. -- Shaun Jackman Mon, 15 Aug 2011 11:07:19 -0700 abyss (1.2.7-2) unstable; urgency=low * debian/control: Add `XS-Autobuild: yes'. Suggest openmpi-bin. * debian/copyright: Change `Format-Specification' to `Format'. -- Shaun Jackman Thu, 21 Jul 2011 09:55:52 -0700 abyss (1.2.7-1) unstable; urgency=low * Initial release. Closes: #631534. -- Shaun Jackman Fri, 24 Jun 2011 12:16:36 -0700